SubtiBank SubtiBank
yphA [2019-06-07 11:15:00]
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yphA [2019-06-07 11:15:00]

unknown
locus
BSU22860
pI
9.25
mw
22.82 kDa
protein length
199 aa Sequence Blast
gene length
600 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    2,392,751 2,393,350

    The protein

    [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|5DA8B27AC6A0E0B4115512BD948C31964D387A8E|yphA]-[gene|448375DF74EB0482A6CD1ACFE04D117C1319E2B2|seaA]
    description
    [Pubmed|15699190,8759874]

    sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|15699190,8759874], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]

    • regulation

  • expressed early during sporulation in the forespore ([protein|search|SigF]) [Pubmed|15699190,8759874]
    • view in new tab

    genes
    [gene|5DA8B27AC6A0E0B4115512BD948C31964D387A8E|yphA]-[gene|448375DF74EB0482A6CD1ACFE04D117C1319E2B2|seaA]-[gene|910109496E4A41EC892996DEEB81971FCBD9CB05|ypzH]-[gene|B2270316642C66BC2DA86EBDCD1BF6A33CC6A1DC|yphC]-[gene|8440C1DBE485BB9EF2904FAA5D709A574C3819A4|gpsA]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A421 (yphA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/421 NBRP B. subtilis, Japan]
  • BKE22860 ([gene|5DA8B27AC6A0E0B4115512BD948C31964D387A8E|yphA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTACTTCCTCCATATT, downstream forward: _UP4_AACAAAGGAGCTACCAAAAT
  • BKK22860 ([gene|5DA8B27AC6A0E0B4115512BD948C31964D387A8E|yphA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTACTTCCTCCATATT, downstream forward: _UP4_AACAAAGGAGCTACCAAAAT

    • References

  • 15699190,8759874